Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abcf1Q6P542 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Gm715-201ENSMUST00000117865 831 ntBASIC18.67■□□□□ 0.58
Abcf1Q6P542 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Abcf1Q6P542 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abcf1Q6P542 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Mir6982-201ENSMUST00000184354 68 ntBASIC18.66■□□□□ 0.58
Abcf1Q6P542 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.66■□□□□ 0.58
Abcf1Q6P542 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Abcf1Q6P542 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Abcf1Q6P542 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abcf1Q6P542 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Abcf1Q6P542 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Abcf1Q6P542 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Abcf1Q6P542 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.63■□□□□ 0.57
Abcf1Q6P542 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.63■□□□□ 0.57
Abcf1Q6P542 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms