Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Gm44450-201ENSMUST00000199528 114 ntBASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Gm45058-201ENSMUST00000205810 766 ntBASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac4Q6NZM9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac4Q6NZM9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac4Q6NZM9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac4Q6NZM9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hdac4Q6NZM9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Mir6982-201ENSMUST00000184354 68 ntBASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hdac4Q6NZM9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Gm18959-201ENSMUST00000208954 655 ntBASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hdac4Q6NZM9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hdac4Q6NZM9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms