Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sim1Q61045 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sim1Q61045 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sim1Q61045 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sim1Q61045 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sim1Q61045 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sim1Q61045 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.53■□□□□ 0.24
Sim1Q61045 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sim1Q61045 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.52■□□□□ 0.24
Sim1Q61045 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Gm13884-201ENSMUST00000118103 829 ntBASIC16.52■□□□□ 0.24
Sim1Q61045 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.52■□□□□ 0.24
Sim1Q61045 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sim1Q61045 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sim1Q61045 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.52■□□□□ 0.23
Sim1Q61045 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sim1Q61045 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sim1Q61045 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sim1Q61045 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.51■□□□□ 0.23
Sim1Q61045 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sim1Q61045 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sim1Q61045 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.51■□□□□ 0.23
Sim1Q61045 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.51■□□□□ 0.23
Sim1Q61045 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Sim1Q61045 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Gm10566-201ENSMUST00000086739 996 ntBASIC16.51■□□□□ 0.23
Sim1Q61045 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.51■□□□□ 0.23
Sim1Q61045 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sim1Q61045 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sim1Q61045 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Sim1Q61045 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sim1Q61045 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sim1Q61045 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.5■□□□□ 0.23
Sim1Q61045 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sim1Q61045 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.49■□□□□ 0.23
Sim1Q61045 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sim1Q61045 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Sim1Q61045 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
Sim1Q61045 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.49■□□□□ 0.23
Sim1Q61045 Gm37722-201ENSMUST00000193757 208 ntBASIC16.49■□□□□ 0.23
Sim1Q61045 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.49■□□□□ 0.23
Sim1Q61045 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.49■□□□□ 0.23
Sim1Q61045 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms