Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb1Q61009 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb1Q61009 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb1Q61009 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb1Q61009 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Scarb1Q61009 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.1□□□□□ -0.15
Scarb1Q61009 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb1Q61009 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb1Q61009 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.1□□□□□ -0.15
Scarb1Q61009 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Scarb1Q61009 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb1Q61009 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb1Q61009 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scarb1Q61009 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb1Q61009 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Mir6349-201ENSMUST00000184059 97 ntBASIC14.08□□□□□ -0.16
Scarb1Q61009 Gm26524-201ENSMUST00000192339 390 ntBASIC14.08□□□□□ -0.16
Scarb1Q61009 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Mtag2-201ENSMUST00000058665 714 ntBASIC14.08□□□□□ -0.16
Scarb1Q61009 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Scarb1Q61009 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb1Q61009 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.08□□□□□ -0.16
Scarb1Q61009 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.08□□□□□ -0.16
Scarb1Q61009 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Scarb1Q61009 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.07□□□□□ -0.16
Scarb1Q61009 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.07□□□□□ -0.16
Scarb1Q61009 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb1Q61009 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms