Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps54Q5SPW0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Gm29707-201ENSMUST00000196325 491 ntBASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vps54Q5SPW0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps54Q5SPW0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vps54Q5SPW0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Gm27704-201ENSMUST00000185094 107 ntBASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.01■□□□□ 0.79
Vps54Q5SPW0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps54Q5SPW0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vps54Q5SPW0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps54Q5SPW0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps54Q5SPW0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.98■□□□□ 0.79
Vps54Q5SPW0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms