Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc88aQ5SNZ0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ccdc88aQ5SNZ0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc88aQ5SNZ0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc88aQ5SNZ0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc88aQ5SNZ0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm8000-201ENSMUST00000188378 592 ntBASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ccdc88aQ5SNZ0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc88aQ5SNZ0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc88aQ5SNZ0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc88aQ5SNZ0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Gm12350-201ENSMUST00000121208 462 ntBASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc88aQ5SNZ0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc88aQ5SNZ0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms