Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Gm5417-201ENSMUST00000079706 384 ntBASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav5d-4Q5R1F6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Gm27463-201ENSMUST00000183569 57 ntBASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav5d-4Q5R1F6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav5d-4Q5R1F6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav5d-4Q5R1F6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav5d-4Q5R1F6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms