Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim80Q3V061 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trim80Q3V061 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim80Q3V061 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Gm13216-201ENSMUST00000117145 591 ntBASIC17.27■□□□□ 0.36
Trim80Q3V061 Gm13158-201ENSMUST00000122007 736 ntBASIC17.27■□□□□ 0.36
Trim80Q3V061 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim80Q3V061 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trim80Q3V061 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim80Q3V061 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim80Q3V061 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim80Q3V061 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim80Q3V061 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim80Q3V061 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim80Q3V061 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim80Q3V061 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim80Q3V061 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim80Q3V061 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Gm2399-201ENSMUST00000104944 225 ntBASIC17.25■□□□□ 0.35
Trim80Q3V061 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim80Q3V061 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim80Q3V061 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim80Q3V061 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.24■□□□□ 0.35
Trim80Q3V061 Gm37055-201ENSMUST00000191866 133 ntBASIC17.24■□□□□ 0.35
Trim80Q3V061 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.24■□□□□ 0.35
Trim80Q3V061 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim80Q3V061 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim80Q3V061 Mir8112-201ENSMUST00000184382 131 ntBASIC17.23■□□□□ 0.35
Trim80Q3V061 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms