Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
Zfp560Q3URI6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Zfp560Q3URI6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zfp560Q3URI6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zfp560Q3URI6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Gm18032-201ENSMUST00000222541 538 ntBASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Zfp560Q3URI6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Gm26039-201ENSMUST00000158152 144 ntBASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zfp560Q3URI6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Gm10013-201ENSMUST00000106074 672 ntBASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Zfp560Q3URI6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Zfp560Q3URI6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Zfp560Q3URI6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gm21559-201ENSMUST00000220638 855 ntBASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gm8587-201ENSMUST00000076538 843 ntBASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Zfp560Q3URI6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.69■□□□□ 0.26
Zfp560Q3URI6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms