Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Psmb5-202ENSMUST00000227257 622 ntBASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Arhgef40Q3UPH7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Arhgef40Q3UPH7 Gm15467-201ENSMUST00000120582 445 ntBASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Arhgef40Q3UPH7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Gm43182-201ENSMUST00000199476 2528 ntBASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Gm25406-201ENSMUST00000157599 105 ntBASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 CT943659.1-201ENSMUST00000215459 326 ntBASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Arhgef40Q3UPH7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Arhgef40Q3UPH7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Gm6550-201ENSMUST00000187574 993 ntBASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Arhgef40Q3UPH7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Arhgef40Q3UPH7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Gm6089-201ENSMUST00000197666 938 ntBASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Arhgef40Q3UPH7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms