Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Q3U1D9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.48□□□□□ -0.09
Q3U1D9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Q3U1D9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Q3U1D9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.47□□□□□ -0.09
Q3U1D9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Q3U1D9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.47□□□□□ -0.09
Q3U1D9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.47□□□□□ -0.09
Q3U1D9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Q3U1D9 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.47□□□□□ -0.09
Q3U1D9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Q3U1D9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Q3U1D9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.46□□□□□ -0.09
Q3U1D9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Q3U1D9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.46□□□□□ -0.09
Q3U1D9 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.46□□□□□ -0.09
Q3U1D9 Gm15794-201ENSMUST00000120182 631 ntBASIC14.46□□□□□ -0.09
Q3U1D9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.46□□□□□ -0.09
Q3U1D9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Q3U1D9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Q3U1D9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Q3U1D9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Q3U1D9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Q3U1D9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Q3U1D9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Q3U1D9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Q3U1D9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Olfr129-201ENSMUST00000122318 993 ntBASIC14.45□□□□□ -0.1
Q3U1D9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.45□□□□□ -0.1
Q3U1D9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.45□□□□□ -0.1
Q3U1D9 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.45□□□□□ -0.1
Q3U1D9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Q3U1D9 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.45□□□□□ -0.1
Q3U1D9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Q3U1D9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Q3U1D9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Q3U1D9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Q3U1D9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3U1D9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Q3U1D9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.44□□□□□ -0.1
Q3U1D9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3U1D9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.44□□□□□ -0.1
Q3U1D9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Q3U1D9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.44□□□□□ -0.1
Q3U1D9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms