Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fndc4Q3TR08 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fndc4Q3TR08 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Gm8520-201ENSMUST00000186517 868 ntBASIC14.24□□□□□ -0.13
Fndc4Q3TR08 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fndc4Q3TR08 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Gm13168-201ENSMUST00000121771 632 ntBASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Gm27011-201ENSMUST00000182352 972 ntBASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fndc4Q3TR08 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms