Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nhej1Q3KNJ2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nhej1Q3KNJ2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.78■□□□□ 0.44
Nhej1Q3KNJ2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nhej1Q3KNJ2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nhej1Q3KNJ2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nhej1Q3KNJ2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nhej1Q3KNJ2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms