Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nkx3-2P97503 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.75■□□□□ 0.11
Nkx3-2P97503 Gm29518-201ENSMUST00000190858 372 ntBASIC15.75■□□□□ 0.11
Nkx3-2P97503 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.75■□□□□ 0.11
Nkx3-2P97503 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nkx3-2P97503 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Gm14859-201ENSMUST00000117752 357 ntBASIC15.74■□□□□ 0.11
Nkx3-2P97503 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nkx3-2P97503 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gm10566-201ENSMUST00000086739 996 ntBASIC15.73■□□□□ 0.11
Nkx3-2P97503 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gm10819-201ENSMUST00000099988 561 ntBASIC15.73■□□□□ 0.11
Nkx3-2P97503 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nkx3-2P97503 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.72■□□□□ 0.11
Nkx3-2P97503 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nkx3-2P97503 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms