Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CiitaP79621 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CiitaP79621 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CiitaP79621 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CiitaP79621 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.07■□□□□ 0.48
CiitaP79621 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CiitaP79621 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CiitaP79621 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CiitaP79621 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CiitaP79621 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.06■□□□□ 0.48
CiitaP79621 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CiitaP79621 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
CiitaP79621 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.06■□□□□ 0.48
CiitaP79621 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CiitaP79621 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CiitaP79621 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CiitaP79621 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CiitaP79621 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.05■□□□□ 0.48
CiitaP79621 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.05■□□□□ 0.48
CiitaP79621 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.05■□□□□ 0.48
CiitaP79621 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.05■□□□□ 0.48
CiitaP79621 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.05■□□□□ 0.48
CiitaP79621 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CiitaP79621 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CiitaP79621 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CiitaP79621 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.04■□□□□ 0.48
CiitaP79621 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.04■□□□□ 0.48
CiitaP79621 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CiitaP79621 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CiitaP79621 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CiitaP79621 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.03■□□□□ 0.48
CiitaP79621 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.03■□□□□ 0.48
CiitaP79621 Gm17971-201ENSMUST00000190239 806 ntBASIC18.03■□□□□ 0.48
CiitaP79621 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.03■□□□□ 0.48
CiitaP79621 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CiitaP79621 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
CiitaP79621 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CiitaP79621 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CiitaP79621 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CiitaP79621 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.02■□□□□ 0.48
CiitaP79621 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.02■□□□□ 0.48
CiitaP79621 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CiitaP79621 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms