Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Ufd1P70362 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ufd1P70362 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ufd1P70362 Gm38285-201ENSMUST00000192928 922 ntBASIC14.37□□□□□ -0.11
Ufd1P70362 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.37□□□□□ -0.11
Ufd1P70362 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ufd1P70362 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ufd1P70362 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.37□□□□□ -0.11
Ufd1P70362 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ufd1P70362 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ufd1P70362 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ufd1P70362 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
Ufd1P70362 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ufd1P70362 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.35□□□□□ -0.11
Ufd1P70362 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Gm27454-201ENSMUST00000185090 204 ntBASIC14.35□□□□□ -0.11
Ufd1P70362 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.35□□□□□ -0.11
Ufd1P70362 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.35□□□□□ -0.11
Ufd1P70362 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ufd1P70362 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ufd1P70362 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.34□□□□□ -0.11
Ufd1P70362 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.34□□□□□ -0.11
Ufd1P70362 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ufd1P70362 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.34□□□□□ -0.11
Ufd1P70362 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.34□□□□□ -0.11
Ufd1P70362 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms