Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Crnkl1P63154 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Gm26524-201ENSMUST00000192339 390 ntBASIC16.55■□□□□ 0.24
Crnkl1P63154 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.55■□□□□ 0.24
Crnkl1P63154 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Crnkl1P63154 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Crnkl1P63154 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Crnkl1P63154 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.54■□□□□ 0.24
Crnkl1P63154 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.54■□□□□ 0.24
Crnkl1P63154 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Crnkl1P63154 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Crnkl1P63154 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.54■□□□□ 0.24
Crnkl1P63154 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.54■□□□□ 0.24
Crnkl1P63154 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.54■□□□□ 0.24
Crnkl1P63154 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.54■□□□□ 0.24
Crnkl1P63154 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Crnkl1P63154 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Crnkl1P63154 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Crnkl1P63154 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.53■□□□□ 0.24
Crnkl1P63154 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.53■□□□□ 0.24
Crnkl1P63154 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Crnkl1P63154 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Crnkl1P63154 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.52■□□□□ 0.24
Crnkl1P63154 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.52■□□□□ 0.24
Crnkl1P63154 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Crnkl1P63154 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.52■□□□□ 0.24
Crnkl1P63154 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.52■□□□□ 0.24
Crnkl1P63154 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.52■□□□□ 0.24
Crnkl1P63154 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.52■□□□□ 0.24
Crnkl1P63154 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Crnkl1P63154 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Crnkl1P63154 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Crnkl1P63154 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Crnkl1P63154 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Crnkl1P63154 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Crnkl1P63154 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Crnkl1P63154 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms