Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpl39P62892 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpl39P62892 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rpl39P62892 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpl39P62892 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpl39P62892 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rpl39P62892 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rpl39P62892 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rpl39P62892 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rpl39P62892 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rpl39P62892 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.94□□□□□ -0.5
Rpl39P62892 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.94□□□□□ -0.5
Rpl39P62892 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rpl39P62892 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rpl39P62892 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpl39P62892 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.93□□□□□ -0.5
Rpl39P62892 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.93□□□□□ -0.5
Rpl39P62892 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.93□□□□□ -0.5
Rpl39P62892 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpl39P62892 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Rpl39P62892 Gm11927-201ENSMUST00000118472 759 ntBASIC11.93□□□□□ -0.5
Rpl39P62892 Gm11643-201ENSMUST00000119578 864 ntBASIC11.93□□□□□ -0.5
Rpl39P62892 Gm6211-202ENSMUST00000167849 925 ntBASIC11.93□□□□□ -0.5
Rpl39P62892 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpl39P62892 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rpl39P62892 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rpl39P62892 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rpl39P62892 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rpl39P62892 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rpl39P62892 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpl39P62892 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpl39P62892 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.92□□□□□ -0.5
Rpl39P62892 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.92□□□□□ -0.5
Rpl39P62892 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.92□□□□□ -0.5
Rpl39P62892 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Rpl39P62892 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rpl39P62892 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rpl39P62892 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms