Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a1P61620 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a1P61620 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.7□□□□□ -0.06
Sec61a1P61620 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Gm37292-201ENSMUST00000192062 758 ntBASIC14.7□□□□□ -0.06
Sec61a1P61620 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a1P61620 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a1P61620 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Mir2861-201ENSMUST00000175539 82 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Mir6349-201ENSMUST00000184059 97 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.69□□□□□ -0.06
Sec61a1P61620 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.69□□□□□ -0.06
Sec61a1P61620 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sec61a1P61620 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Gm12382-201ENSMUST00000122005 922 ntBASIC14.68□□□□□ -0.06
Sec61a1P61620 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Gm37055-201ENSMUST00000191866 133 ntBASIC14.68□□□□□ -0.06
Sec61a1P61620 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sec61a1P61620 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Sec61a1P61620 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sec61a1P61620 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sec61a1P61620 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms