Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Gm22240-201ENSMUST00000175225 82 ntBASIC18.82■□□□□ 0.6
Rrp1P56183 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.81■□□□□ 0.6
Rrp1P56183 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Il3ra-202ENSMUST00000223589 738 ntBASIC18.81■□□□□ 0.6
Rrp1P56183 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.81■□□□□ 0.6
Rrp1P56183 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rrp1P56183 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rrp1P56183 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp1P56183 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rrp1P56183 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.8■□□□□ 0.6
Rrp1P56183 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Rrp1P56183 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rrp1P56183 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Rrp1P56183 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp1P56183 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.79■□□□□ 0.6
Rrp1P56183 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rrp1P56183 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.79■□□□□ 0.6
Rrp1P56183 Gm7638-201ENSMUST00000121348 967 ntBASIC18.79■□□□□ 0.6
Rrp1P56183 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.79■□□□□ 0.6
Rrp1P56183 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.79■□□□□ 0.6
Rrp1P56183 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rrp1P56183 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rrp1P56183 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp1P56183 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.78■□□□□ 0.6
Rrp1P56183 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rrp1P56183 Gm5643-201ENSMUST00000117081 966 ntBASIC18.78■□□□□ 0.6
Rrp1P56183 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Gm10698-201ENSMUST00000182663 604 ntBASIC18.78■□□□□ 0.6
Rrp1P56183 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Rrp1P56183 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.78■□□□□ 0.6
Rrp1P56183 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp1P56183 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.77■□□□□ 0.6
Rrp1P56183 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp1P56183 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rrp1P56183 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rrp1P56183 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp1P56183 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms