Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nub1P54729 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.94■□□□□ 0.46
Nub1P54729 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nub1P54729 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nub1P54729 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Nub1P54729 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nub1P54729 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nub1P54729 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Nub1P54729 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Mir1668-201ENSMUST00000184114 107 ntBASIC17.93■□□□□ 0.46
Nub1P54729 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nub1P54729 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Nub1P54729 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.93■□□□□ 0.46
Nub1P54729 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.93■□□□□ 0.46
Nub1P54729 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nub1P54729 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.92■□□□□ 0.46
Nub1P54729 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Nub1P54729 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nub1P54729 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nub1P54729 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nub1P54729 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nub1P54729 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.91■□□□□ 0.46
Nub1P54729 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.91■□□□□ 0.46
Nub1P54729 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Nub1P54729 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nub1P54729 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.91■□□□□ 0.46
Nub1P54729 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nub1P54729 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.9■□□□□ 0.46
Nub1P54729 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nub1P54729 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Gm13186-201ENSMUST00000118031 316 ntBASIC17.9■□□□□ 0.46
Nub1P54729 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.9■□□□□ 0.46
Nub1P54729 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.9■□□□□ 0.46
Nub1P54729 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.9■□□□□ 0.46
Nub1P54729 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nub1P54729 Phf7-203ENSMUST00000226565 1971 ntBASIC17.9■□□□□ 0.46
Nub1P54729 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nub1P54729 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nub1P54729 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.89■□□□□ 0.45
Nub1P54729 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms