Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.11■□□□□ 0.33
TubP50586 Gm11336-201ENSMUST00000118168 334 ntBASIC17.11■□□□□ 0.33
TubP50586 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Gm23634-201ENSMUST00000175071 91 ntBASIC17.11■□□□□ 0.33
TubP50586 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.11■□□□□ 0.33
TubP50586 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TubP50586 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TubP50586 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.1■□□□□ 0.33
TubP50586 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.1■□□□□ 0.33
TubP50586 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TubP50586 Gm18115-201ENSMUST00000221209 621 ntBASIC17.1■□□□□ 0.33
TubP50586 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.1■□□□□ 0.33
TubP50586 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TubP50586 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TubP50586 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TubP50586 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TubP50586 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TubP50586 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.09■□□□□ 0.33
TubP50586 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.09■□□□□ 0.33
TubP50586 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TubP50586 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TubP50586 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TubP50586 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TubP50586 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TubP50586 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TubP50586 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
TubP50586 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.07■□□□□ 0.32
TubP50586 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TubP50586 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TubP50586 Gm37722-201ENSMUST00000193757 208 ntBASIC17.07■□□□□ 0.32
TubP50586 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.07■□□□□ 0.32
TubP50586 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TubP50586 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TubP50586 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TubP50586 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TubP50586 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TubP50586 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TubP50586 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.06■□□□□ 0.32
TubP50586 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TubP50586 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TubP50586 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TubP50586 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TubP50586 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms