Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.8■□□□□ 0.44
HttP42859 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HttP42859 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.8■□□□□ 0.44
HttP42859 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HttP42859 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.8■□□□□ 0.44
HttP42859 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HttP42859 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.79■□□□□ 0.44
HttP42859 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.79■□□□□ 0.44
HttP42859 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.79■□□□□ 0.44
HttP42859 Gm44335-201ENSMUST00000196879 141 ntBASIC17.79■□□□□ 0.44
HttP42859 Gm44297-201ENSMUST00000198304 141 ntBASIC17.79■□□□□ 0.44
HttP42859 Gm44346-201ENSMUST00000198851 141 ntBASIC17.79■□□□□ 0.44
HttP42859 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.79■□□□□ 0.44
HttP42859 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.79■□□□□ 0.44
HttP42859 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HttP42859 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.79■□□□□ 0.44
HttP42859 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HttP42859 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.79■□□□□ 0.44
HttP42859 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
HttP42859 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HttP42859 Gm13597-201ENSMUST00000121239 375 ntBASIC17.78■□□□□ 0.44
HttP42859 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HttP42859 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.78■□□□□ 0.44
HttP42859 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
HttP42859 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.78■□□□□ 0.44
HttP42859 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HttP42859 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.78■□□□□ 0.44
HttP42859 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.77■□□□□ 0.44
HttP42859 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.77■□□□□ 0.44
HttP42859 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.77■□□□□ 0.44
HttP42859 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HttP42859 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.77■□□□□ 0.44
HttP42859 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HttP42859 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HttP42859 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HttP42859 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HttP42859 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HttP42859 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
HttP42859 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HttP42859 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.76■□□□□ 0.43
HttP42859 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.76■□□□□ 0.43
HttP42859 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.76■□□□□ 0.43
HttP42859 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.76■□□□□ 0.43
HttP42859 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.76■□□□□ 0.43
HttP42859 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.76■□□□□ 0.43
HttP42859 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HttP42859 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.76■□□□□ 0.43
HttP42859 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HttP42859 Gm44492-201ENSMUST00000197012 141 ntBASIC17.76■□□□□ 0.43
HttP42859 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HttP42859 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HttP42859 Gm27300-201ENSMUST00000184085 97 ntBASIC17.75■□□□□ 0.43
HttP42859 Gm27335-201ENSMUST00000184758 97 ntBASIC17.75■□□□□ 0.43
HttP42859 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HttP42859 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HttP42859 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HttP42859 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HttP42859 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HttP42859 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HttP42859 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.74■□□□□ 0.43
HttP42859 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
HttP42859 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.74■□□□□ 0.43
HttP42859 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.74■□□□□ 0.43
HttP42859 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HttP42859 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HttP42859 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.74■□□□□ 0.43
HttP42859 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HttP42859 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms