Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cxcl12P40224 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Cxcl12P40224 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.18■□□□□ 0.34
Cxcl12P40224 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.18■□□□□ 0.34
Cxcl12P40224 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cxcl12P40224 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.17■□□□□ 0.34
Cxcl12P40224 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.17■□□□□ 0.34
Cxcl12P40224 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Gm25911-201ENSMUST00000157621 56 ntBASIC17.17■□□□□ 0.34
Cxcl12P40224 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Cxcl12P40224 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cxcl12P40224 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.17■□□□□ 0.34
Cxcl12P40224 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cxcl12P40224 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cxcl12P40224 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl12P40224 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Gm7222-201ENSMUST00000117512 906 ntBASIC17.16■□□□□ 0.34
Cxcl12P40224 Gm8097-201ENSMUST00000117903 829 ntBASIC17.16■□□□□ 0.34
Cxcl12P40224 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Cxcl12P40224 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cxcl12P40224 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl12P40224 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cxcl12P40224 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cxcl12P40224 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.15■□□□□ 0.34
Cxcl12P40224 Gm12497-201ENSMUST00000138778 237 ntBASIC17.15■□□□□ 0.34
Cxcl12P40224 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Cxcl12P40224 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.15■□□□□ 0.34
Cxcl12P40224 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.15■□□□□ 0.34
Cxcl12P40224 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl12P40224 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cxcl12P40224 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 Gm11780-201ENSMUST00000136880 516 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.14■□□□□ 0.33
Cxcl12P40224 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.14■□□□□ 0.33
Cxcl12P40224 Mir3113-201ENSMUST00000175478 76 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Gm8655-201ENSMUST00000221159 852 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl12P40224 Gm10175-201ENSMUST00000086013 645 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 Grk6-206ENSMUST00000224995 2971 ntBASIC17.14■□□□□ 0.33
Cxcl12P40224 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cxcl12P40224 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms