Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a11P31650 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a11P31650 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a11P31650 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a11P31650 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a11P31650 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.83■□□□□ 0.13
Slc6a11P31650 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Slc6a11P31650 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Slc6a11P31650 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Gm6659-201ENSMUST00000174752 547 ntBASIC15.83■□□□□ 0.12
Slc6a11P31650 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.83■□□□□ 0.12
Slc6a11P31650 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slc6a11P31650 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc6a11P31650 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc6a11P31650 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a11P31650 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Gm43183-201ENSMUST00000200632 547 ntBASIC15.82■□□□□ 0.12
Slc6a11P31650 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.82■□□□□ 0.12
Slc6a11P31650 Gm18025-201ENSMUST00000221733 862 ntBASIC15.82■□□□□ 0.12
Slc6a11P31650 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc6a11P31650 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a11P31650 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.81■□□□□ 0.12
Slc6a11P31650 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Gm13559-201ENSMUST00000120476 863 ntBASIC15.81■□□□□ 0.12
Slc6a11P31650 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Gm7889-201ENSMUST00000185591 958 ntBASIC15.81■□□□□ 0.12
Slc6a11P31650 Gm42545-201ENSMUST00000202755 922 ntBASIC15.81■□□□□ 0.12
Slc6a11P31650 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.81■□□□□ 0.12
Slc6a11P31650 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.81■□□□□ 0.12
Slc6a11P31650 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a11P31650 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Slc6a11P31650 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a11P31650 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms