Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Gm27011-201ENSMUST00000182352 972 ntBASIC14.4□□□□□ -0.1
Slc6a1P31648 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Slc6a1P31648 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc6a1P31648 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Slc6a1P31648 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Slc6a1P31648 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Slc6a1P31648 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc6a1P31648 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc6a1P31648 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Gm26524-201ENSMUST00000192339 390 ntBASIC14.38□□□□□ -0.11
Slc6a1P31648 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.38□□□□□ -0.11
Slc6a1P31648 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc6a1P31648 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.38□□□□□ -0.11
Slc6a1P31648 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc6a1P31648 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.37□□□□□ -0.11
Slc6a1P31648 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc6a1P31648 Rab3c-203ENSMUST00000224180 967 ntBASIC14.37□□□□□ -0.11
Slc6a1P31648 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc6a1P31648 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc6a1P31648 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc6a1P31648 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Slc6a1P31648 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms