Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde6bP23440 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pde6bP23440 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.14■□□□□ 0.5
Pde6bP23440 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pde6bP23440 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6bP23440 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Pde6bP23440 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Gm15794-201ENSMUST00000120182 631 ntBASIC18.14■□□□□ 0.49
Pde6bP23440 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6bP23440 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.14■□□□□ 0.49
Pde6bP23440 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.14■□□□□ 0.49
Pde6bP23440 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pde6bP23440 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pde6bP23440 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pde6bP23440 Gm13186-201ENSMUST00000118031 316 ntBASIC18.13■□□□□ 0.49
Pde6bP23440 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pde6bP23440 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.13■□□□□ 0.49
Pde6bP23440 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.13■□□□□ 0.49
Pde6bP23440 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Pde6bP23440 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pde6bP23440 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pde6bP23440 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pde6bP23440 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pde6bP23440 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.12■□□□□ 0.49
Pde6bP23440 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pde6bP23440 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Pde6bP23440 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pde6bP23440 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pde6bP23440 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pde6bP23440 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pde6bP23440 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pde6bP23440 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Pde6bP23440 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Pde6bP23440 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Pde6bP23440 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pde6bP23440 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.11■□□□□ 0.49
Pde6bP23440 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pde6bP23440 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.11■□□□□ 0.49
Pde6bP23440 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.11■□□□□ 0.49
Pde6bP23440 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pde6bP23440 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pde6bP23440 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pde6bP23440 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.1■□□□□ 0.49
Pde6bP23440 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.1■□□□□ 0.49
Pde6bP23440 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pde6bP23440 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms