Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TP20293 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TP20293 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Gm15565-201ENSMUST00000118890 427 ntBASIC15.7■□□□□ 0.1
TP20293 Gm13559-201ENSMUST00000120476 863 ntBASIC15.7■□□□□ 0.1
TP20293 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.7■□□□□ 0.1
TP20293 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.7■□□□□ 0.1
TP20293 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TP20293 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TP20293 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.7■□□□□ 0.1
TP20293 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.7■□□□□ 0.1
TP20293 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TP20293 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.69■□□□□ 0.1
TP20293 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.69■□□□□ 0.1
TP20293 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TP20293 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.69■□□□□ 0.1
TP20293 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TP20293 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.68■□□□□ 0.1
TP20293 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.68■□□□□ 0.1
TP20293 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.68■□□□□ 0.1
TP20293 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.68■□□□□ 0.1
TP20293 Gm43799-201ENSMUST00000201845 579 ntBASIC15.68■□□□□ 0.1
TP20293 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TP20293 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TP20293 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TP20293 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
TP20293 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TP20293 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.67■□□□□ 0.1
TP20293 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TP20293 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.67■□□□□ 0.1
TP20293 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TP20293 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms