Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.03■□□□□ 0.32
Rb1P13405 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rb1P13405 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.02■□□□□ 0.32
Rb1P13405 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.02■□□□□ 0.32
Rb1P13405 Gm17807-201ENSMUST00000186869 298 ntBASIC17.02■□□□□ 0.32
Rb1P13405 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rb1P13405 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rb1P13405 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rb1P13405 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rb1P13405 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rb1P13405 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rb1P13405 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.02■□□□□ 0.31
Rb1P13405 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rb1P13405 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rb1P13405 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rb1P13405 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rb1P13405 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rb1P13405 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rb1P13405 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.01■□□□□ 0.31
Rb1P13405 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.01■□□□□ 0.31
Rb1P13405 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Gm7213-201ENSMUST00000215977 950 ntBASIC17.01■□□□□ 0.31
Rb1P13405 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rb1P13405 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Rb1P13405 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rb1P13405 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rb1P13405 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17■□□□□ 0.31
Rb1P13405 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17■□□□□ 0.31
Rb1P13405 Gm13401-201ENSMUST00000117074 291 ntBASIC17■□□□□ 0.31
Rb1P13405 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Rb1P13405 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Gm29791-202ENSMUST00000207888 369 ntBASIC17■□□□□ 0.31
Rb1P13405 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rb1P13405 AC120002.2-201ENSMUST00000220205 773 ntBASIC17■□□□□ 0.31
Rb1P13405 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rb1P13405 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rb1P13405 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rb1P13405 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rb1P13405 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Gm28033-201ENSMUST00000184224 96 ntBASIC16.99■□□□□ 0.31
Rb1P13405 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.99■□□□□ 0.31
Rb1P13405 Gm18669-201ENSMUST00000216049 778 ntBASIC16.99■□□□□ 0.31
Rb1P13405 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.99■□□□□ 0.31
Rb1P13405 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rb1P13405 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.99■□□□□ 0.31
Rb1P13405 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms