Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccl3P10855 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccl3P10855 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Gm25925-201ENSMUST00000158314 306 ntBASIC14.72□□□□□ -0.05
Ccl3P10855 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Ccl3P10855 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.72□□□□□ -0.05
Ccl3P10855 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.72□□□□□ -0.05
Ccl3P10855 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccl3P10855 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.72□□□□□ -0.05
Ccl3P10855 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccl3P10855 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccl3P10855 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccl3P10855 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccl3P10855 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Ccl3P10855 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccl3P10855 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.71□□□□□ -0.05
Ccl3P10855 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Ccl3P10855 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.71□□□□□ -0.05
Ccl3P10855 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccl3P10855 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccl3P10855 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccl3P10855 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl3P10855 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl3P10855 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl3P10855 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccl3P10855 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccl3P10855 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccl3P10855 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccl3P10855 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccl3P10855 Gm8969-201ENSMUST00000199694 526 ntBASIC14.7□□□□□ -0.06
Ccl3P10855 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccl3P10855 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccl3P10855 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccl3P10855 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccl3P10855 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccl3P10855 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ccl3P10855 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Gm12350-201ENSMUST00000121208 462 ntBASIC14.69□□□□□ -0.06
Ccl3P10855 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccl3P10855 Gm25745-201ENSMUST00000174945 133 ntBASIC14.69□□□□□ -0.06
Ccl3P10855 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.69□□□□□ -0.06
Ccl3P10855 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccl3P10855 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ccl3P10855 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccl3P10855 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccl3P10855 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccl3P10855 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms