Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TnfP06804 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TnfP06804 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TnfP06804 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
TnfP06804 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.69■□□□□ 0.42
TnfP06804 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.69■□□□□ 0.42
TnfP06804 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.69■□□□□ 0.42
TnfP06804 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.69■□□□□ 0.42
TnfP06804 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TnfP06804 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TnfP06804 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TnfP06804 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TnfP06804 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.68■□□□□ 0.42
TnfP06804 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TnfP06804 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.68■□□□□ 0.42
TnfP06804 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TnfP06804 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TnfP06804 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TnfP06804 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.67■□□□□ 0.42
TnfP06804 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TnfP06804 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.67■□□□□ 0.42
TnfP06804 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TnfP06804 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.67■□□□□ 0.42
TnfP06804 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TnfP06804 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TnfP06804 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TnfP06804 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.66■□□□□ 0.42
TnfP06804 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TnfP06804 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.66■□□□□ 0.42
TnfP06804 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.66■□□□□ 0.42
TnfP06804 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
TnfP06804 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TnfP06804 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.66■□□□□ 0.42
TnfP06804 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
TnfP06804 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TnfP06804 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.65■□□□□ 0.42
TnfP06804 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.65■□□□□ 0.42
TnfP06804 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
TnfP06804 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TnfP06804 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TnfP06804 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TnfP06804 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TnfP06804 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TnfP06804 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TnfP06804 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TnfP06804 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TnfP06804 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.64■□□□□ 0.41
TnfP06804 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TnfP06804 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TnfP06804 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TnfP06804 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.64■□□□□ 0.41
TnfP06804 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TnfP06804 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms