Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CfdP03953 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.98□□□□□ -0.17
CfdP03953 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CfdP03953 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CfdP03953 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.98□□□□□ -0.17
CfdP03953 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CfdP03953 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
CfdP03953 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Prob1-201ENSMUST00000097619 3021 ntBASIC13.97□□□□□ -0.17
CfdP03953 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CfdP03953 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CfdP03953 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.97□□□□□ -0.17
CfdP03953 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CfdP03953 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CfdP03953 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CfdP03953 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CfdP03953 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Gm7290-201ENSMUST00000104990 617 ntBASIC13.96□□□□□ -0.17
CfdP03953 Gm12918-201ENSMUST00000120234 636 ntBASIC13.96□□□□□ -0.17
CfdP03953 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.96□□□□□ -0.17
CfdP03953 Gm15710-201ENSMUST00000121821 636 ntBASIC13.96□□□□□ -0.17
CfdP03953 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Gm5075-201ENSMUST00000196916 622 ntBASIC13.96□□□□□ -0.17
CfdP03953 Gm10138-203ENSMUST00000206952 366 ntBASIC13.96□□□□□ -0.17
CfdP03953 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.96□□□□□ -0.17
CfdP03953 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.96□□□□□ -0.17
CfdP03953 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CfdP03953 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CfdP03953 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CfdP03953 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CfdP03953 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CfdP03953 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.95□□□□□ -0.18
CfdP03953 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CfdP03953 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CfdP03953 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CfdP03953 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CfdP03953 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CfdP03953 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CfdP03953 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.94□□□□□ -0.18
CfdP03953 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CfdP03953 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms