Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxa3P02831 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxa3P02831 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxa3P02831 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.98□□□□□ -0.17
Hoxa3P02831 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxa3P02831 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxa3P02831 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxa3P02831 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Gm9013-201ENSMUST00000132939 882 ntBASIC13.97□□□□□ -0.17
Hoxa3P02831 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Gm29518-201ENSMUST00000190858 372 ntBASIC13.97□□□□□ -0.17
Hoxa3P02831 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Hoxa3P02831 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.97□□□□□ -0.17
Hoxa3P02831 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxa3P02831 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hoxa3P02831 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.96□□□□□ -0.17
Hoxa3P02831 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Gm11355-201ENSMUST00000121120 306 ntBASIC13.96□□□□□ -0.17
Hoxa3P02831 Gm7284-201ENSMUST00000131667 944 ntBASIC13.96□□□□□ -0.17
Hoxa3P02831 Gm18958-201ENSMUST00000174258 762 ntBASIC13.96□□□□□ -0.17
Hoxa3P02831 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Ank2-226ENSMUST00000189368 339 ntBASIC13.96□□□□□ -0.17
Hoxa3P02831 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hoxa3P02831 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxa3P02831 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa3P02831 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa3P02831 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxa3P02831 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxa3P02831 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms