Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.32□□□□□ -0.12
H3f3cP02301 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.31□□□□□ -0.12
H3f3cP02301 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
H3f3cP02301 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H3f3cP02301 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.31□□□□□ -0.12
H3f3cP02301 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.31□□□□□ -0.12
H3f3cP02301 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H3f3cP02301 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
H3f3cP02301 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.31□□□□□ -0.12
H3f3cP02301 Gm45058-201ENSMUST00000205810 766 ntBASIC14.31□□□□□ -0.12
H3f3cP02301 Gm18959-201ENSMUST00000208954 655 ntBASIC14.31□□□□□ -0.12
H3f3cP02301 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.31□□□□□ -0.12
H3f3cP02301 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.31□□□□□ -0.12
H3f3cP02301 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3f3cP02301 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.3□□□□□ -0.12
H3f3cP02301 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Gm18958-201ENSMUST00000174258 762 ntBASIC14.3□□□□□ -0.12
H3f3cP02301 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
H3f3cP02301 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
H3f3cP02301 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
H3f3cP02301 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.29□□□□□ -0.12
H3f3cP02301 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.29□□□□□ -0.12
H3f3cP02301 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
H3f3cP02301 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
H3f3cP02301 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.29□□□□□ -0.12
H3f3cP02301 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
H3f3cP02301 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
H3f3cP02301 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.29□□□□□ -0.12
H3f3cP02301 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
H3f3cP02301 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.29□□□□□ -0.12
H3f3cP02301 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Haglr-201ENSMUST00000100000 2085 ntBASIC14.28□□□□□ -0.12
H3f3cP02301 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.28□□□□□ -0.12
H3f3cP02301 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.28□□□□□ -0.12
H3f3cP02301 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Mir5130-201ENSMUST00000175160 84 ntBASIC14.28□□□□□ -0.12
H3f3cP02301 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
H3f3cP02301 Gm9987-201ENSMUST00000069768 567 ntBASIC14.28□□□□□ -0.12
H3f3cP02301 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms