Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DffbO54788 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DffbO54788 Gm24841-201ENSMUST00000158676 357 ntBASIC14.35□□□□□ -0.11
DffbO54788 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
DffbO54788 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
DffbO54788 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.35□□□□□ -0.11
DffbO54788 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
DffbO54788 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.35□□□□□ -0.11
DffbO54788 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
DffbO54788 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.34□□□□□ -0.11
DffbO54788 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.34□□□□□ -0.11
DffbO54788 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.34□□□□□ -0.11
DffbO54788 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DffbO54788 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DffbO54788 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
DffbO54788 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
DffbO54788 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DffbO54788 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DffbO54788 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
DffbO54788 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DffbO54788 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
DffbO54788 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.33□□□□□ -0.12
DffbO54788 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.33□□□□□ -0.12
DffbO54788 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
DffbO54788 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.33□□□□□ -0.12
DffbO54788 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DffbO54788 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
DffbO54788 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DffbO54788 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DffbO54788 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DffbO54788 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.32□□□□□ -0.12
DffbO54788 Gm20049-201ENSMUST00000219950 730 ntBASIC14.32□□□□□ -0.12
DffbO54788 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DffbO54788 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DffbO54788 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.32□□□□□ -0.12
DffbO54788 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DffbO54788 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.32□□□□□ -0.12
DffbO54788 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DffbO54788 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms