Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccr6O54689 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccr6O54689 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccr6O54689 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Ccr6O54689 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccr6O54689 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.04□□□□□ -0.16
Ccr6O54689 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccr6O54689 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccr6O54689 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccr6O54689 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccr6O54689 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Ccr6O54689 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Gm6576-201ENSMUST00000169678 883 ntBASIC14.03□□□□□ -0.16
Ccr6O54689 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccr6O54689 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccr6O54689 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.03□□□□□ -0.16
Ccr6O54689 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccr6O54689 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccr6O54689 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccr6O54689 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ccr6O54689 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccr6O54689 Gm44549-201ENSMUST00000208351 577 ntBASIC14.02□□□□□ -0.17
Ccr6O54689 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccr6O54689 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccr6O54689 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ccr6O54689 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccr6O54689 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccr6O54689 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccr6O54689 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms