Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.19■□□□□ 0.34
Sdc4O35988 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sdc4O35988 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sdc4O35988 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sdc4O35988 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.18■□□□□ 0.34
Sdc4O35988 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.18■□□□□ 0.34
Sdc4O35988 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sdc4O35988 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc4O35988 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.17■□□□□ 0.34
Sdc4O35988 Gm18421-201ENSMUST00000204122 625 ntBASIC17.17■□□□□ 0.34
Sdc4O35988 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc4O35988 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.16■□□□□ 0.34
Sdc4O35988 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.16■□□□□ 0.34
Sdc4O35988 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc4O35988 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sdc4O35988 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdc4O35988 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdc4O35988 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdc4O35988 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sdc4O35988 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sdc4O35988 Gm28033-201ENSMUST00000184224 96 ntBASIC17.15■□□□□ 0.34
Sdc4O35988 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.15■□□□□ 0.34
Sdc4O35988 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.15■□□□□ 0.34
Sdc4O35988 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.15■□□□□ 0.34
Sdc4O35988 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.15■□□□□ 0.34
Sdc4O35988 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc4O35988 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.14■□□□□ 0.34
Sdc4O35988 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sdc4O35988 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sdc4O35988 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sdc4O35988 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.14■□□□□ 0.33
Sdc4O35988 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.14■□□□□ 0.33
Sdc4O35988 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sdc4O35988 Gm27741-201ENSMUST00000185060 237 ntBASIC17.14■□□□□ 0.33
Sdc4O35988 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.14■□□□□ 0.33
Sdc4O35988 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc4O35988 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms