Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Mir8098-201ENSMUST00000184011 137 ntBASIC18.22■□□□□ 0.51
Sptlc1O35704 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sptlc1O35704 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptlc1O35704 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Gm13312-201ENSMUST00000119631 718 ntBASIC18.21■□□□□ 0.51
Sptlc1O35704 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sptlc1O35704 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sptlc1O35704 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptlc1O35704 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.21■□□□□ 0.51
Sptlc1O35704 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sptlc1O35704 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Gm44882-201ENSMUST00000205702 802 ntBASIC18.2■□□□□ 0.5
Sptlc1O35704 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sptlc1O35704 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sptlc1O35704 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Sptlc1O35704 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.19■□□□□ 0.5
Sptlc1O35704 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.19■□□□□ 0.5
Sptlc1O35704 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sptlc1O35704 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.19■□□□□ 0.5
Sptlc1O35704 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptlc1O35704 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.18■□□□□ 0.5
Sptlc1O35704 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.18■□□□□ 0.5
Sptlc1O35704 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sptlc1O35704 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptlc1O35704 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms