Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk2O35491 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
Clk2O35491 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clk2O35491 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Clk2O35491 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.11■□□□□ 0.49
Clk2O35491 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.11■□□□□ 0.49
Clk2O35491 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk2O35491 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Clk2O35491 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.1■□□□□ 0.49
Clk2O35491 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.1■□□□□ 0.49
Clk2O35491 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.1■□□□□ 0.49
Clk2O35491 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk2O35491 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clk2O35491 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Clk2O35491 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.09■□□□□ 0.49
Clk2O35491 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Gm10052-201ENSMUST00000168019 960 ntBASIC18.09■□□□□ 0.49
Clk2O35491 Gm44430-201ENSMUST00000203376 995 ntBASIC18.09■□□□□ 0.49
Clk2O35491 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.09■□□□□ 0.49
Clk2O35491 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.09■□□□□ 0.49
Clk2O35491 Gm7729-201ENSMUST00000050143 801 ntBASIC18.09■□□□□ 0.49
Clk2O35491 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.09■□□□□ 0.49
Clk2O35491 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk2O35491 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.08■□□□□ 0.49
Clk2O35491 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Clk2O35491 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clk2O35491 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clk2O35491 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.08■□□□□ 0.49
Clk2O35491 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clk2O35491 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.08■□□□□ 0.49
Clk2O35491 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clk2O35491 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.08■□□□□ 0.48
Clk2O35491 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Clk2O35491 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.08■□□□□ 0.48
Clk2O35491 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clk2O35491 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.08■□□□□ 0.48
Clk2O35491 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.08■□□□□ 0.48
Clk2O35491 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Clk2O35491 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.08■□□□□ 0.48
Clk2O35491 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.08■□□□□ 0.48
Clk2O35491 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clk2O35491 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.08■□□□□ 0.48
Clk2O35491 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.07■□□□□ 0.48
Clk2O35491 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clk2O35491 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Clk2O35491 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk2O35491 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms