Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cx3cl1O35188 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.67■□□□□ 0.1
Cx3cl1O35188 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Actl10-202ENSMUST00000226583 1501 ntBASIC15.67■□□□□ 0.1
Cx3cl1O35188 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cx3cl1O35188 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Cx3cl1O35188 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Gm27389-201ENSMUST00000183622 195 ntBASIC15.66■□□□□ 0.1
Cx3cl1O35188 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cx3cl1O35188 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.65■□□□□ 0.1
Cx3cl1O35188 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Gm10566-201ENSMUST00000086739 996 ntBASIC15.65■□□□□ 0.1
Cx3cl1O35188 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cx3cl1O35188 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cx3cl1O35188 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Gm21559-201ENSMUST00000220638 855 ntBASIC15.64■□□□□ 0.09
Cx3cl1O35188 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Gm8587-201ENSMUST00000076538 843 ntBASIC15.64■□□□□ 0.09
Cx3cl1O35188 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cx3cl1O35188 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cx3cl1O35188 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms