Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.03■□□□□ 0.8
NpcdF8VQB8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.03■□□□□ 0.8
NpcdF8VQB8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.03■□□□□ 0.8
NpcdF8VQB8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NpcdF8VQB8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Gm14822-201ENSMUST00000122247 291 ntBASIC20.02■□□□□ 0.8
NpcdF8VQB8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NpcdF8VQB8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NpcdF8VQB8 Phf7-203ENSMUST00000226565 1971 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gm9727-201ENSMUST00000161387 555 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.01■□□□□ 0.79
NpcdF8VQB8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NpcdF8VQB8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NpcdF8VQB8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20■□□□□ 0.79
NpcdF8VQB8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
NpcdF8VQB8 Gm14140-201ENSMUST00000119999 995 ntBASIC20■□□□□ 0.79
NpcdF8VQB8 Gm27000-201ENSMUST00000182943 842 ntBASIC20■□□□□ 0.79
NpcdF8VQB8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20■□□□□ 0.79
NpcdF8VQB8 Gm43935-201ENSMUST00000203569 1050 ntBASIC20■□□□□ 0.79
NpcdF8VQB8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20■□□□□ 0.79
NpcdF8VQB8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NpcdF8VQB8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NpcdF8VQB8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.99■□□□□ 0.79
NpcdF8VQB8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Gm25990-201ENSMUST00000102440 86 ntBASIC19.99■□□□□ 0.79
NpcdF8VQB8 Gm4995-201ENSMUST00000117247 432 ntBASIC19.99■□□□□ 0.79
NpcdF8VQB8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Gm26308-201ENSMUST00000157768 69 ntBASIC19.99■□□□□ 0.79
NpcdF8VQB8 Mir8112-201ENSMUST00000184382 131 ntBASIC19.99■□□□□ 0.79
NpcdF8VQB8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NpcdF8VQB8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms