Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.9□□□□□ -0.02
Shank1D3YZU1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.89□□□□□ -0.03
Shank1D3YZU1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm23935-201ENSMUST00000102303 57 ntBASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm24270-201ENSMUST00000102326 57 ntBASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm15165-201ENSMUST00000118140 502 ntBASIC14.89□□□□□ -0.03
Shank1D3YZU1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm24245-201ENSMUST00000157318 57 ntBASIC14.89□□□□□ -0.03
Shank1D3YZU1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shank1D3YZU1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm13036-201ENSMUST00000117799 748 ntBASIC14.88□□□□□ -0.03
Shank1D3YZU1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm6736-201ENSMUST00000166583 948 ntBASIC14.88□□□□□ -0.03
Shank1D3YZU1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.88□□□□□ -0.03
Shank1D3YZU1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shank1D3YZU1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Gm2756-201ENSMUST00000195851 400 ntBASIC14.87□□□□□ -0.03
Shank1D3YZU1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.87□□□□□ -0.03
Shank1D3YZU1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shank1D3YZU1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.86□□□□□ -0.03
Shank1D3YZU1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Gm7063-201ENSMUST00000186840 981 ntBASIC14.86□□□□□ -0.03
Shank1D3YZU1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Shank1D3YZU1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms