Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Gm6089-201ENSMUST00000197666 938 ntBASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 AV026068-213ENSMUST00000223675 1171 ntBASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Scn7aB1AYL1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn7aB1AYL1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scn7aB1AYL1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm37935-201ENSMUST00000192012 982 ntBASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gm10175-201ENSMUST00000086013 645 ntBASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn7aB1AYL1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.45■■□□□ 1.02
Scn7aB1AYL1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn7aB1AYL1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Gm5682-201ENSMUST00000173402 505 ntBASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Gm5867-201ENSMUST00000063197 592 ntBASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Gm27646-201ENSMUST00000183989 110 ntBASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn7aB1AYL1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.43■■□□□ 1.02
Scn7aB1AYL1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms