Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh2d4bA6X942 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh2d4bA6X942 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh2d4bA6X942 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Mir770-201ENSMUST00000103252 94 ntBASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh2d4bA6X942 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Mir8098-201ENSMUST00000184011 137 ntBASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh2d4bA6X942 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Mir8112-201ENSMUST00000184382 131 ntBASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Gm37722-201ENSMUST00000193757 208 ntBASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh2d4bA6X942 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms