Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Shroom2A2ALU4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Fst-202ENSMUST00000223640 2612 ntBASIC26.27■■□□□ 1.8
Shroom2A2ALU4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Gm9172-201ENSMUST00000212092 954 ntBASIC26.27■■□□□ 1.8
Shroom2A2ALU4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC26.27■■□□□ 1.8
Shroom2A2ALU4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 AC114585.2-202ENSMUST00000228094 426 ntBASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Shroom2A2ALU4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm43231-201ENSMUST00000202960 2258 ntBASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm15427-201ENSMUST00000117288 531 ntBASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm11745-201ENSMUST00000121669 448 ntBASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm27646-201ENSMUST00000183989 110 ntBASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Shroom2A2ALU4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Shroom2A2ALU4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Gm13597-201ENSMUST00000121239 375 ntBASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Gm7653-201ENSMUST00000214567 508 ntBASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC26.24■■□□□ 1.79
Shroom2A2ALU4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 AC124732.2-201ENSMUST00000221977 316 ntBASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Shroom2A2ALU4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Shroom2A2ALU4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Gm43125-201ENSMUST00000201724 730 ntBASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Nrn1-204ENSMUST00000224323 1779 ntBASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom2A2ALU4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Shroom2A2ALU4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Shroom2A2ALU4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Shroom2A2ALU4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Shroom2A2ALU4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Shroom2A2ALU4 Mir449b-201ENSMUST00000104833 80 ntBASIC26.19■■□□□ 1.78
Shroom2A2ALU4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC26.19■■□□□ 1.78
Shroom2A2ALU4 Rassf8-202ENSMUST00000058538 1131 ntBASIC26.19■■□□□ 1.78
Shroom2A2ALU4 Gm2423-201ENSMUST00000074863 733 ntBASIC26.19■■□□□ 1.78
Shroom2A2ALU4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms