Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc112A0AUP1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Dancr-204ENSMUST00000132389 2347 ntBASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Gm10653-202ENSMUST00000139570 835 ntBASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc112A0AUP1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc112A0AUP1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Gm18958-201ENSMUST00000174258 762 ntBASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Gm20760-201ENSMUST00000179197 648 ntBASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc112A0AUP1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Gm7791-201ENSMUST00000219066 539 ntBASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc112A0AUP1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ccdc112A0AUP1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc112A0AUP1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc112A0AUP1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.02■□□□□ 0.63
Ccdc112A0AUP1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ccdc112A0AUP1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc112A0AUP1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms