Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm18101-201ENSMUST00000215769 548 ntBASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm27389-201ENSMUST00000183622 195 ntBASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atg4a-psA0A0G2JFS9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm37722-201ENSMUST00000193757 208 ntBASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm29707-201ENSMUST00000196325 491 ntBASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4a-psA0A0G2JFS9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms