Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ank2-226ENSMUST00000189368 339 ntBASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm27742-201ENSMUST00000184667 60 ntBASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.08■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Tcrg-V3A0A0G2JEW2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tcrg-V3A0A0G2JEW2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms