Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Asic1-205ENSMUST00000228185 1818 ntBASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv3A0A0A6YYE2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Trbv3A0A0A6YYE2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv3A0A0A6YYE2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv3A0A0A6YYE2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm44549-201ENSMUST00000208351 577 ntBASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm6576-201ENSMUST00000169678 883 ntBASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm7514-201ENSMUST00000209475 934 ntBASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv3A0A0A6YYE2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trbv3A0A0A6YYE2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms