Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gm12085-201ENSMUST00000119263 940 ntBASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ighv3-3A0A0A6YWL2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ighv3-3A0A0A6YWL2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms